ÌÇÐÄvlog

Chemistry and Biochemistry
Hands holding models of chemical bonds in front of a computer display screen.

Publications

Topics in Chemistry and Biochemistry

  • Chackalamannil, S.,ÌýD.P. Rotella, S. Ward. 2017. Comprehensive Medicinal Chemistry III. ISBN 9780128032008
  • Barat, R., D. Cedio-Fengya and J. Stevens. 2017. The Maximum Mixedness Model Applied with Detailed Reaction Mechanisms. International Journal of Chemical Reactor Engineering. DOI 10.1515, Jan., 2017 ahead of print, ISSN 2194-5748.
  • Bhat R., A. Adam, J.J. Lee, E.C. Henry, T.A. Gasiewicz,ÌýD.P. Rotella. 2014. Toward the Discovery of Drug Like Epigallocatechin Gallate Analogs as Hsp90 Inhibitors. Bioorg. Med. Chem. Lett. 24, 2263-2266.
  • Bhat R., A. Adam, J.J. Lee, G. Deloison, Y. Rouillé, K. Séron and D.P. Rotella. 2014. Structure-activity Studies of (-)-Epigallocatechin Gallate Derivatives as HCV Entry Inhibitors Bioorg. Med. Chem. Lett. 24, 4162-4165.
  • Bhat R., S.R. Tummalapalli,ÌýD.P. Rotella. 2014. An Update on Hsp90 Inhibitor Biology, Medicinal Chemistry and Clinical Development J. Med. Chem. 57, 8718-8728.
  • Chen-Wiegart, Y.K., G. Williams, C. Zhao, H. Jiang, L. Li, M. Demkowicz, M. Seita, M. Short, S. Ferry, T. Wada, H. Kato, K.W. Chou, S. Petrash,ÌýJ. Catalano, Y. Yao, A. Murphy, N. Zumbulyadis, S.A. Centeno, C. Dybowski, and J. Thieme. 2016. Early science commissioning results of the sub-micron resolution X-ray spectroscopy beamline (SRX) in the field of materials science and engineering. AIP Conference Proceedings 1764, 030004. http://aip.scitation.org/doi/pdf/10.1063/1.4961138
  • Degenstein J.C., P. Murria, M. Easton, H. Sheng, M. Hurt, A.R. Dow,ÌýJ. Gao, J.J. Nash, R. Agrawal, W.N. Delgass, F.H. Ribeiro, H.I. Kenttamaa. 2015. Fast Pyrolysis of 13C-Labeled Cellobioses: Gaining Insights Into the Mechanisms of Fast Pyrolysis of Carbohydrates, J. Org. Chem. 80, 1909-1914.
  • Desai N., D.A. Thomas,ÌýJ. Lee,ÌýJ. Gao and J.L. Beauchamp. 2016. Eradicating Mass Spectrometric Glycan Rearrangement by Utilizing Free Radicals, Chemical Science (Royal Society of Chemistry Flagship Journal). 7, 5390-5397.
  • Gindt, Y.M.,ÌýA. MessyaszÌý²¹²Ô»åÌýP.I. Jumbo. 2015. Binding of substrate locks the electrochemistry of CRY-DASH into DNA repair. Biochemistry 54: 2802-2805.
  • Gindt, Y.M.,ÌýB.H. Edani,ÌýA. Olejnikova,ÌýA.N. Roberts, S. Munshi and R.J. Stanley. 2016. The Missing Electrostatic Interactions Between DNA Substrate and Sulfolobus solfataricus DNA Photolyase: What is the Role of Charged Amino Acids in Thermophilic DNA Binding Proteins? Journal of Physical Chemistry B 120: 10234-10242.
  • Goodey, N.M. and C.P. Talgar. 2016. Guided Inquiry in a Biochemistry Laboratory Course Improves Experimental Design Ability. Chemistry Education Research and Practice. 17.4, 1127-1144.
  • Hagmann, D.F.,ÌýN.M. Goodey,ÌýC. Mathieu,ÌýJ. Evans, M.F. Aronson, F. Gallagher and J.A. Krumins. 2015. Effect of Metal Contamination on Microbial Metabolic Potential in Soil. Soil Biology and Biochemistry, 91, 291-297.
  • Krumins, J.A.,ÌýN.M. Goodey and F. Gallagher. 2015. Plant-soil interactions in metal contaminated soils. Soil Biology and Biochemistry, 80, 224-231.
  • Minnow, Y.V.T,ÌýR. Goldberg,ÌýS.R. Tummalapalli,ÌýD.P. RotellaÌý²¹²Ô»åÌýN.M. Goodey. 2016. The Mechanism of Inhibition of Botulinum Neurotoxin Type A by Two Quinolinol Compounds. Archives of Biochemistry and Biophysics, 618, 15-22.
  • Perez-Abraham, R.,ÌýK. Garabiles Sanchez,ÌýU. Gubler,ÌýJ. SiekierkaÌý²¹²Ô»åÌýN.M. Goodey. 2016. Expression, Purification and Enzymatic Characterization of Brugia malayi Dihydrofolate Reductase. Protein Expression and Purification. 128, 81-85.
  • Schelvis, J.P.Ìý²¹²Ô»åÌýY.M. Gindt. 2017. A Review of Spectroscopic and Biophysical-Chemical Studies of the Complex of Cyclobutane Pyrimidine Dimer Photolyase and Cryptochrome DASH with Substrate DNA. Photochemistry and Photobiology 93: 26-36.
  • Schelvis, J.P.M., X. Zhu and Y.M. Gindt. 2015. Enzyme-Substrate Binding Kinetics Indicate That Photolyase Recognizes an Extrahelical Cyclobutane Thymine Dimer. Biochemistry 54: 6176-85.
  • Sohn C.H.,ÌýJ. Gao, D.A. Thomas, T.-Y. Kim, W.A. Goddard, J. Beauchamp. 2015. Mechanisms and Energetics of Free Radical Initiated Disulfide Bond Cleavage in Model Peptides and Insulin by Mass Spectrometry, Chemical Science (Royal Society of Chemistry Flagship Journal). 6, 4550-4560.
  • Tykesson E., Y. Mao, M. Maccarana, Y. Pu,ÌýJ. Gao, C. Lin, J. Zaia, G. Westergren-Thorsson, U. Ellervik, L. Malmström and A. Malmström. 2016. Deciphering the mode of action of the processive polysaccharide modifying enzyme dermatan sulfate epimerase 1 by hydrogen-deuterium exchange mass spectrometry, Chemical Science (Royal Society of Chemistry Flagship Journal). 7, 1447-1456.
  • Talgar, C.P. and N.M. Goodey. 2015. Views from Academia and Industry on Skills needed for the Modern Research Environment. Biochemistry and Molecular Biology Education (BAMBED), 43, 5, 324-332.